Package: CancerGram
Type: Package
Title: Prediction of Anticancer Peptides
Version: 1.0.0
LazyData: TRUE
Date: 2020-11-16
Authors@R: c(person("Michal", "Burdukiewicz", 
           email = "michalburdukiewicz@gmail.com", 
           comment = c(ORCID = "0000-0001-8926-582X"),
           role = c("cre", "aut")),
           person("Katarzyna", "Sidorczuk", 
           email = "sidorczuk.katarzyna17@gmail.com",
           role = c("aut"),
           comment = c(ORCID = "0000-0001-6576-9054")),
           person("Filip", "Pietluch", 
           email = "fpietluch@gmail.com",
           role = c("ctb"),
           comment = c(ORCID = "0000-0001-6218-9804")),
           person("Dominik", "Rafacz", 
           email = "dominikrafacz@gmail.com",
           role = c("ctb"),
           comment = c(ORCID = "0000-0003-0925-1909")),
           person("Mateusz", "Bakala", 
           email = "matibakala@gmail.com",
           comment = c(ORCID = "0000-0002-3213-2484"),
           role = c("ctb")),
           person("Jadwiga", "Słowik", 
           comment = c(ORCID = "0000-0003-3466-8933"),
           email = "jadwiga.slowik5@gmail.com",
           role = c("ctb")))
Description: Predicts anticancer peptides using random forests trained
        on the n-gram encoded peptides. The implemented algorithm can
        be accessed from both the command line and shiny-based GUI. The
        CancerGram model is too large for CRAN and it has to be
        downloaded separately from the repository:
        <https://github.com/BioGenies/CancerGramModel>. For more
        information see: Burdukiewicz et al. (2020)
        <doi:10.3390/pharmaceutics12111045>.
License: GPL-3
URL: https://github.com/BioGenies/CancerGram
BugReports: https://github.com/BioGenies/CancerGram/issues
Encoding: UTF-8
Depends: R (>= 3.5.0)
Imports: biogram, devtools, pbapply, ranger, shiny, stringi, dplyr
Suggests: DT, ggplot2, pander, rmarkdown, shinythemes, spelling
RoxygenNote: 7.1.1
Language: en-US
Config/pak/sysreqs: cmake libfontconfig1-dev libfreetype6-dev
        libfribidi-dev git libgmp3-dev make libharfbuzz-dev libgit2-dev
        libicu-dev libjpeg-dev libpng-dev libtiff-dev libuv1-dev
        libwebp-dev libxml2-dev libssl-dev libx11-dev zlib1g-dev
Repository: https://biogenies.r-universe.dev
Date/Publication: 2020-11-19 20:29:36 UTC
RemoteUrl: https://github.com/biogenies/cancergram
RemoteRef: HEAD
RemoteSha: 8f8353bf2ec194b3ac832d8519d718bde8307ab6
NeedsCompilation: no
Packaged: 2026-06-04 06:37:19 UTC; root
Author: Michal Burdukiewicz [cre, aut] (ORCID:
    <https://orcid.org/0000-0001-8926-582X>),
  Katarzyna Sidorczuk [aut] (ORCID:
    <https://orcid.org/0000-0001-6576-9054>),
  Filip Pietluch [ctb] (ORCID: <https://orcid.org/0000-0001-6218-9804>),
  Dominik Rafacz [ctb] (ORCID: <https://orcid.org/0000-0003-0925-1909>),
  Mateusz Bakala [ctb] (ORCID: <https://orcid.org/0000-0002-3213-2484>),
  Jadwiga Słowik [ctb] (ORCID: <https://orcid.org/0000-0003-3466-8933>)
Maintainer: Michal Burdukiewicz <michalburdukiewicz@gmail.com>